Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAPVILGVSEGAAKYMGGFKTVVKMTEGLVEDLKITVPVAIHLDHGSSFDSCKAAIDAGFSSVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYADPQECLRVVKEANIDALAAALGSVHGPY----HGEPVLGFDEMKEISELTGAPLVLHGGS---------------------GIPEHQIKKAIELGHSKINVNTECQIVWTAAVREKLATDDKVYDPRKVIGPGVDAIIKTVTEKIQEFGSNGKA
2ISW Chain:A ((2-307))-PLCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKY-SDMIYLKKLCEAALEK-HPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTL----------VQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKS----RLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSAGHA


General information:
TITO was launched using:
RESULT:

Template: 2ISW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121493 for 2375 contacts (-51.2/contact) +
2D Compatibility (PS) -29830 + (NN) -12921 + (LL) -236
1D Compatibility (HY) -23600 + (ID) 6450
Total energy: -194530.0 ( -81.91 by residue)
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_2ISW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ISW-query.scw
PDB file : Tito_Scwrl_2ISW.pdb: