Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLM-RSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
4D5D Chain:A ((249-307))----------------------------------------------------AGTLYTRVRVGKNETKNTDRSGGGNAGINYFKDIRKATVGYEQSIG----ESWVAKAEYEYAN-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5868 for 272 contacts (21.6/contact) +
2D Compatibility (PS) -5898 + (NN) 2095 + (LL) 7404
1D Compatibility (HY) 400 + (ID) 1000
Total energy: 8869.0 ( 32.61 by residue)
QMean score : -0.275

(partial model without unconserved sides chains):
PDB file : Tito_4D5D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D5D-query.scw
PDB file : Tito_Scwrl_4D5D.pdb: