Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFMQKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYALGYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVTLNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK |
1OJ8 Chain:A ((95-103)) | ----------------------------ELPIHFAGVGK--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 149 for 19 contacts (7.8/contact) +
2D Compatibility (PS) -882 + (NN) 568 + (LL) 18368
1D Compatibility (HY) -400 + (ID) 0
Total energy: 17803.0 ( 937.00 by residue)
QMean score : -0.327
|
|
|