Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLD----------EDIRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT |
1V4E Chain:A ((198-240)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIYQMFDDIMDFAGMEKIGKDGFLDLKNGVASFPLVTAMEKFP---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6134 for 166 contacts (-37.0/contact) +
2D Compatibility (PS) -3295 + (NN) 1139 + (LL) 26560
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 16470.0 ( 99.22 by residue)
QMean score : -0.032
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