Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTTRKALYYLDKGKTKEAIRLLETCWKQEVTTKNKRDIFTATVLLSDVLYQSGEHFPEIYQQLMS--ILEEMQDLEAVEFEREKAKQIFAELDEYFSEVGTFFQGDSLAELWLEFDYENDYKDVYPTPQRVAAIEAELGYKLPKSYIYLMRHTQNGGIVSTGSVPTTEPSSWSENCVAITGIMGIGNQGISALNGMHNTNFWIEEWGYPDVGLAIADCPSAGHDMVFLDYRNCGKTGEPAVVHIDQEADYKIMKLADNFEAFILSLYREEY |
| 3LDL Chain:A ((241-312)) | ------------------------------------------------------EHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLF-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6730 for 419 contacts (-16.1/contact) +
2D Compatibility (PS) -7271 + (NN) -364 + (LL) 12880
1D Compatibility (HY) -800 + (ID) 750
Total energy: -3035.0 ( -7.24 by residue)
QMean score : 0.322
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