Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFMQIWKPAVIGFLLLTLVCGVLYPGVVTVFAGVAFHDKANGSIIEEKLADGTTGKVGSAEIGQTFTEPEYLIGRAASDGVATNLNPTSEEQKQLVEKRIAWWHKLDPTNNRVIPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTKEVKEIIAEHTSNRLLGFWGEPTVNVLQVNLALDRLKM |
| 2BUP Chain:A ((44-78)) | -------------------------------------------------------------------FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57 for 144 contacts (0.4/contact) +
2D Compatibility (PS) -3528 + (NN) 228 + (LL) 11252
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 5259.0 ( 36.52 by residue)
QMean score : 0.074
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