Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIKEIAKLAGVSVTTVSRVLNNHPYVAEEKRVRVQAVIDELDYSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPKEEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYGP---IIACEYVESKEVSCSYIDRVKAYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFG----PVGDNRFLSECYTLEDGLKAGEHFFAAGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGKVL--EITTLDHNLKKLGENAFTIFEQGKLQRIKVEHELIRRKTV |
| 2HSG Chain:A ((5-305)) | ---IYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLAS-KTTTVGVIIP--SNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMS-GNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTL-EEPINHAKKVKGYKRALTESGLPVRDSYIVEGDYTYDSGIEAVEKLLEE-DEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146696 for 2309 contacts (-63.5/contact) +
2D Compatibility (PS) -31180 + (NN) -13825 + (LL) 1840
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -211211.0 ( -91.47 by residue)
QMean score : 0.446
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