Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP----EYMLSHTCLVREPEKFYQFVTENMY-YPNAVPNVIHKKMAEIETEKDV-TIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLK----SDIHT--DCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMMESDAVKVFEEI
2H2F Chain:A ((3-199))
MKEFLDLLNESRLTVTLTGAGISTPSGIPD------------QNVFDIDFFYSH------PEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAEL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2H2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96894 for 1266 contacts (-76.5/contact) +
2D Compatibility (PS) -19370 + (NN) -9860 + (LL) 4348
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -142376.0 ( -112.46 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_2H2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H2F-query.scw
PDB file :
Tito_Scwrl_2H2F.pdb
: