Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKE---GRDFNEVIQEITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3S1U Chain:A ((1-213))
MKIFLDTANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDWK----
General information:
TITO was launched using:
RESULT:
Template:
3S1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137012 for 1716 contacts (-79.8/contact) +
2D Compatibility (PS) -23082 + (NN) -6953 + (LL) 416
1D Compatibility (HY) -24400 + (ID) 5700
Total energy: -196731.0 ( -114.65 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3S1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S1U-query.scw
PDB file :
Tito_Scwrl_3S1U.pdb
: