Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNELEDKILAILEQHQVGVLTSVQGD-YPHARYMTFLHD--GLTLYTPSGKELPKTDEVRRNPHVSVLIGYESPGSAFLEINGLASLE------EDESIKERI--WENISKEWFRGEDSPSFVVIKIVPEQIRILNSDDDGPDTLDLIG
2AQ6 Chain:A ((5-113))
---VFDDKLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADD-GWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGE-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19778 for 593 contacts (-33.4/contact) +
2D Compatibility (PS) -10841 + (NN) -4697 + (LL) 1720
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -40146.0 ( -67.70 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2AQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AQ6-query.scw
PDB file :
Tito_Scwrl_2AQ6.pdb
: