Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEP----DYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEA---LAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHAR------SLLALETEEQQVALLAEIAENHWNVKQTEARIQEILGVKKQVATKKTKPKRQA--ISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQITIQIPKKK |
| 1TW2 Chain:A ((19-249)) | --------------------------------------------------DALRTLIRLGSLHTPMVVRTAATLRLVDH--ILAGARTVKALAARTDTRPEALLRLI--RHLVAIGLLEEDAPGEFVPTEVGEL---LADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWT------NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLS-DRVDVVEGDFFE---PLPRK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29023 for 1456 contacts (19.9/contact) +
2D Compatibility (PS) -21802 + (NN) 2720 + (LL) 4936
1D Compatibility (HY) -8000 + (ID) 2800
Total energy: 4077.0 ( 2.80 by residue)
QMean score : 0.152
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