Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIE-FDEAFNENLKGVSRIDSLLLILRKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKSTGLLDLRILEILHSK
1O08 Chain:A ((2-189))
----FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKIL--DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1O08.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112638 for 1566 contacts (-71.9/contact) +
2D Compatibility (PS) -20210 + (NN) -10708 + (LL) 2552
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -162854.0 ( -103.99 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1O08.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O08-query.scw
PDB file :
Tito_Scwrl_1O08.pdb
: