Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LASTIYDIAKHAGVSKSTVSRVLNNQANISEESRKKVLAAIDQLNYQPSKLARALTSSGFDAIMVISNRSTTTTTGNPFFSEIIQSISTQAELENFDLILQTAKNSEDELKKCLSKIQEKMIKGIIMLSSPADEDFFHQLDPY-NIPIVVTGKVEGHYKNIYSVDTDNFGDSYALTKHLIKQGHQKIACIHAPLDYHVSIDRLAGFRSCLFDHQLDLRNDWIIDSGYSIEDSYKAALRLMEGPDKPTAVFATDDLKVLSIYKMAADKNLQIPTDFSVIGYNDKVASSFLSPPLTSIDIPINKLGKKATNLLFRLIHQDKNVPKTTIIQTEMIERESIQKINA |
| 1QQA Chain:A ((2-330)) | ---TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLAVNHTKSIGLLA-----TSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193750 for 2775 contacts (-69.8/contact) +
2D Compatibility (PS) -36386 + (NN) -23274 + (LL) 840
1D Compatibility (HY) -24000 + (ID) 5150
Total energy: -281720.0 ( -101.52 by residue)
QMean score : 0.545
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