Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLYIIANPHAGNKNASTIVGKIQELYHTEDISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYLPQ-----HIPCAYYPVGSGNDFARALKIPN-LKETLTAIQTERLKEIN-CFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSKVQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVELDQISLKCQKRYLYM |
2P1R Chain:A ((35-214)) | -------------------------------IHVRVTWEKGDAQRYVDEARRLGVET--VIAGGGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGNAMEIDMAMVNDKTCFINMATGGFGTRITT---------------LGGVSYLIHGLMRMDTLTPDRCEIRGENFHW--QGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLTQSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88512 for 1124 contacts (-78.7/contact) +
2D Compatibility (PS) -17180 + (NN) -298 + (LL) 3208
1D Compatibility (HY) -4400 + (ID) 2300
Total energy: -109482.0 ( -97.40 by residue)
QMean score : 0.361
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