Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQVGSLVEMKKPHACVIKETGKKANQWKVLRVGADIKIQCTNCQHVIMMSRYDFERKLKKVLQP
1TWF Chain:L ((36-56))
-------------------------SKLSLSR---TDAVRCKDCGHRIL----------------
General information:
TITO was launched using:
RESULT:
Template:
1TWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8742 for 81 contacts (-107.9/contact) +
2D Compatibility (PS) -2071 + (NN) 1183 + (LL) 3552
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -7928.0 ( -97.88 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_1TWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TWF-query.scw
PDB file :
Tito_Scwrl_1TWF.pdb
: