Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVT----ERVSIIHTEEKINS-------------DDEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISAG--NTGALLAAGLFVVGRIKGVDRPGLMSTM-PTLDGVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIEVPRVGLLNNGTEET---KGDSLHKEAYELLAA-EPSINFIGNIEARDL--------------MSSVADVVVT-DGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
| 1VMI Chain:A ((33-335)) | ---------DAL-DQ-RVLKAAQYLHQQ-GLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDAL-EKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGE-EPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQ-------------------------------------RLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPR--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114476 for 2179 contacts (-52.5/contact) +
2D Compatibility (PS) -28364 + (NN) -12942 + (LL) 5156
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -161726.0 ( -74.22 by residue)
QMean score : 0.488
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