Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYSTYKNGIEIEVDTHPDFRRRGLATIVAAQLILTCLDKGIY---PSWDAHTRTSLNLSEKLGYEFSHEYIAYEID |
2JLM Chain:A ((84-147)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21224 for 309 contacts (-68.7/contact) +
2D Compatibility (PS) -6656 + (NN) -2994 + (LL) 12204
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -23970.0 ( -77.57 by residue)
QMean score : 0.486
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