Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTNKLKMRETMIAYAFLAPILLFFLIFVFAPMVMGFVTSFFNYSMTQFTFIGLANYNRMFHDSIFMKSLIN----TVIIVIGSVPVVVFFSLFVAANTYEKNVFSRSFYRCVFFLPVVTGSVAVTVVWKWIYDPMSGILNYILKSGHVIEQNISWLGDKHWALLAIIIILLTTSVGQP--IILYIAAMGNIDNSLCEAARVDGANEMQVFWQIKWPSLLPTTLYIAVITTINSFQCFALIQLLTSGGPNYSTST--------LMYYLYEKAFKLS---EYGYANTMGVFLAVMIALISFAQFKILGNDVEY
3PUZ Chain:F ((260-503))----------------------------------------------------GWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKP--AWFSDPTTARTMLIIV--NTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI------------


General information:
TITO was launched using:
RESULT:

Template: 3PUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139493 for 1493 contacts (-93.4/contact) +
2D Compatibility (PS) -23757 + (NN) -8701 + (LL) 7120
1D Compatibility (HY) -22800 + (ID) 3050
Total energy: -190681.0 ( -127.72 by residue)
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_3PUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUZ-query.scw
PDB file : Tito_Scwrl_3PUZ.pdb: