Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYDHLLNLTHYKDINPNLDLAIDYLLSHDLRNLDIGTYHIS---------------PEVIL--MVQSNQLSESFDHIFEYHKKYLDIHYVIEGHEVIKLGKGDKVEVEEYLGDIGFIKCSEETSFDLRDNYIAFFFPEEAHQPNGMGSLGNYVKKGVLKVLMA
2R0O Chain:A ((142-223))
-------------------------------KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEEAIMTYVSSFYHAFSGAL-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2R0O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11613 for 345 contacts (-33.7/contact) +
2D Compatibility (PS) -6569 + (NN) 776 + (LL) 3936
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -19470.0 ( -56.43 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_2R0O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R0O-query.scw
PDB file :
Tito_Scwrl_2R0O.pdb
: