Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRTVAIDIGGTMIKHGIVDNL--GCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDG-IAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHLSDGDFQDLASTTALIA------------------DVAKAH--GDEISRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVFAQHENQAGMLGAYYHFKNRG
4DB3 Chain:A ((29-322))------FDVGGTKIEFGAFNEKLERVATERVPTPTDDY---PLLLETIAGLVAKYDQEFACEGKIGLGLPGMEDADDATVLTV--NVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFELLYAHYYGEEKKAID---IIKANAAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGG-LSNFELIYEEMPKRVPKYLL-SVAKCPKIIKAKHGDSGGVRGAAFLNIKG-


General information:
TITO was launched using:
RESULT:

Template: 4DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150916 for 2123 contacts (-71.1/contact) +
2D Compatibility (PS) -28517 + (NN) -3983 + (LL) 484
1D Compatibility (HY) -14800 + (ID) 3950
Total energy: -201682.0 ( -95.00 by residue)
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_4DB3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DB3-query.scw
PDB file : Tito_Scwrl_4DB3.pdb: