Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRTVAIDIGGTMIKHGIVDNL--GCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDG-IAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHLSDGDFQDLASTTALIA------------------DVAKAH--GDEISRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVFAQHENQAGMLGAYYHFKNRG |
4DB3 Chain:A ((29-322)) | ------FDVGGTKIEFGAFNEKLERVATERVPTPTDDY---PLLLETIAGLVAKYDQEFACEGKIGLGLPGMEDADDATVLTV--NVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFELLYAHYYGEEKKAID---IIKANAAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGG-LSNFELIYEEMPKRVPKYLL-SVAKCPKIIKAKHGDSGGVRGAAFLNIKG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150916 for 2123 contacts (-71.1/contact) +
2D Compatibility (PS) -28517 + (NN) -3983 + (LL) 484
1D Compatibility (HY) -14800 + (ID) 3950
Total energy: -201682.0 ( -95.00 by residue)
QMean score : 0.447
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