Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTEKSRLPSV---GMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY
1IUB Chain:A ((179-286))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISWGSTPNIRVYWQKGREELYEAAYGGSWNTPGQIKDASRPTPSLPDTFIAANSSGNIDISVFFQASGVSLQQWQWISGKGWSIGAVVPTGTPAGW---------


General information:
TITO was launched using:
RESULT:

Template: 1IUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1860 for 645 contacts (2.9/contact) +
2D Compatibility (PS) -11338 + (NN) -6992 + (LL) 9740
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -11130.0 ( -17.26 by residue)
QMean score : 0.272

(partial model without unconserved sides chains):
PDB file : Tito_1IUB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IUB-query.scw
PDB file : Tito_Scwrl_1IUB.pdb: