Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTVEKMITLGKRGDLHARRQAAAYVR-NEIASENYDEASDKYTSTTALQKLFDDIAPRYAERNGGYTRILKTEPRRGDAAPMAIIELV
2RDO Chain:N ((8-116))
---RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVA-----------------KLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELV
General information:
TITO was launched using:
RESULT:
Template:
2RDO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 886563 for 5151 contacts (172.1/contact) +
2D Compatibility (PS) -10033 + (NN) 3067 + (LL) 1352
1D Compatibility (HY) 1600 + (ID) 700
Total energy: 881849.0 ( 171.20 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2RDO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RDO-query.scw
PDB file :
Tito_Scwrl_2RDO.pdb
: