Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKYVKWLIPISIIGMLLAGCQMNSESKSQSNEVKNSKHSAVKKDKKMTKKEQLVYLNEHEQ
3B55 Chain:A ((37-49))
-----------------------------------------------YNTNQIAKWLEAH--
General information:
TITO was launched using:
RESULT:
Template:
3B55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1604 for 44 contacts (36.5/contact) +
2D Compatibility (PS) -1431 + (NN) -1345 + (LL) 3496
1D Compatibility (HY) -400 + (ID) 100
Total energy: 1824.0 ( 41.45 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_3B55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B55-query.scw
PDB file :
Tito_Scwrl_3B55.pdb
: