Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKK---DSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
| 3MBF Chain:A ((6-61)) | --------------------------------------------------------------------------------------------------------------------------------MDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2836 for 225 contacts (12.6/contact) +
2D Compatibility (PS) -5695 + (NN) -1987 + (LL) 8688
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 1092.0 ( 4.85 by residue)
QMean score : 0.444
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