Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITI--VSNKSRSNMRA-QIDIPLFVHTNLDQISDIVTKI--NEEYVSKHPAIVGEPTVFGPTTNANGQFVYRINIFTQNGAQFDIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
| 5AJI Chain:A ((21-279)) | -------------QALLLSYAVNIVAAL----AIIIVGLIIARMISNAVNR-LMISRKIDA---TVA-FLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSI---NFVVR--VWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127704 for 1612 contacts (-79.2/contact) +
2D Compatibility (PS) -26413 + (NN) -7688 + (LL) 2496
1D Compatibility (HY) -24000 + (ID) 3600
Total energy: -186909.0 ( -115.95 by residue)
QMean score : 0.291
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