Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGEEALYENALNLVL---PKAYEAAVAELGLDVVAQPKIDVVSMEKGQDWKLTAEVVTKPEVKLGDYKDLSVEVDASKEVSAEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDF-VGSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGKDAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGT--TEEDLHKQYQADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSA-----DMLKHDIAMKKAVDVITSSATVK |
3GTY Chain:X ((11-408)) | ----------NRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPG--KGRIPKNVLKMKLGEE-FQEYTLDFLMDLIPDTLKDRKLILSPIVTERELKDVTA-------RVVVEVHEEPEVRIGDISKIEVEKVDEEKVLEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVYNEEGKKLTSREYEYVISEDEDRPFV----KDLVGKKKGDVVEIEREY---------EGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKE---GKEIYDVEMKESMREQLLEKLPEIVEI--EISDRTLEILVNEAINRLKREG----RYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVKVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46691 for 2470 contacts (-18.9/contact) +
2D Compatibility (PS) -41807 + (NN) -16538 + (LL) 2128
1D Compatibility (HY) -22800 + (ID) 5700
Total energy: -131408.0 ( -53.20 by residue)
QMean score : 0.519
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