Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHGHYDDALEC----IEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAMVE-TGIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDD---------------------QIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA
3GAK Chain:A ((2-307))-PLCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYL-KKLCEAALEKHP-DIPICIHLDHG---DTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARGVSVEAELG---------------TEPQDAKKFVELTGVDALAVAI-------------LAIDRVKTISD-LTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEK---------FDPRDYLGPGRDAITEMLIPKIKAFGSAGHA


General information:
TITO was launched using:
RESULT:

Template: 3GAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136097 for 2129 contacts (-63.9/contact) +
2D Compatibility (PS) -28292 + (NN) -20464 + (LL) 1748
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -210005.0 ( -98.64 by residue)
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_3GAK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GAK-query.scw
PDB file : Tito_Scwrl_3GAK.pdb: