Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIILTVILVLVIVLLITSLYVVKQQTVAIIERFGKYQKTATSGIHIRVPLGIDKIAARVQLRLLQSEIIVETKTKDNVFVTLNIATQYRVNENNVTDAYYKLIKPEA-QIKSYIEDALRSSVPKLTLDEL-------FEKKDEIALEVQHQVAEEMSTYGYI-----IVKTLITKVEPDAEVKQSMNEINAAQRKR----VAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLADSIQELKDANVTLTEEQIMSIL---LTNQYLDTLNTFAINGNQTIFLPNNPEGVEDIRTQVLSALKTR |
| 4GIK Chain:A ((29-217)) | --------------------------------------------------------------------------------------------------------ISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLI-GYQTKALPAFFCRTSPFDVSIRLDSASE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10662 for 1245 contacts (8.6/contact) +
2D Compatibility (PS) -16982 + (NN) 5290 + (LL) 10800
1D Compatibility (HY) -2400 + (ID) 2350
Total energy: 5020.0 ( 4.03 by residue)
QMean score : 0.184
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