Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALSKLDNLYMAVVADHSKHPHHHGFLEGVEQV-QLNNPTCGDVISLSVKF--DGNIISDIAFAGNGCTISTASSSMMTDAVIGKTKEEALQLA--DVFSKMVQGDQNPKQEKLGDAEFLAGVSKFPQRIKCATLSWNALRKAIERDNQAEL
2Z7E Chain:A ((5-120))
---------YNEKVLDHFLNPRNVGVLEDANGVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIF------------EELGGLP--------PQKIHCTNLGLETLHVAIKDYLMKQG
General information:
TITO was launched using:
RESULT:
Template:
2Z7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51720 for 828 contacts (-62.5/contact) +
2D Compatibility (PS) -11606 + (NN) -4102 + (LL) 1792
1D Compatibility (HY) -9600 + (ID) 2200
Total energy: -77436.0 ( -93.52 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2Z7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z7E-query.scw
PDB file :
Tito_Scwrl_2Z7E.pdb
: