Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADKNRTFKLVGAGSSSTQEKIEKPALSFMQDAWRRLKKNKLAVVSLYLLALLLTFSLASNLFVTQKDANGFDSKKVTTYRNLPPKLSSNLPFWNGSIKYAGNTESTDAYKSQNVPEKVKY---ALGTDSLGRSVAKRIIVGIRISLLVAIAATFIDLIIGVTYGLVSGFAGGRLDTLMQRIVEVISSIPNLVIVTMLGLVLGNGITAIIISIAFTGWTSMSRQVRNLTLSYREREFVLAARSLGESPIKIAFKHILPNISGIIIVQIMMTIPSAIMYEAVLSAINLGVKPPTASLGSLISDAQENLQYYPYQVILPALALVMISLAFILLGDGLRDAFDPKSSDE |
2KUT Chain:A ((2-62)) | ---------------------------------------------------------------------------------DLPITLSKETPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRDTISRIPVGGTGLARVQWKATRKLAGRAANPGVPVYAVVDPDNRVAESDKANNVFSRIVKVLEHHHHHH------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10849 for 233 contacts (46.6/contact) +
2D Compatibility (PS) -5829 + (NN) 514 + (LL) 19704
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 22238.0 ( 95.44 by residue)
QMean score : 0.097
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