Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIIGVGKMASAIIQGLKQT----QHDIVISGSCLERSKEIAER-LDVTYAESHQSLINQADIIMLGIKPQLFEKVL--LPLDITKP--IISMAAGISLARLSQLTRSDLP---LIRIMPNINAQILQSCTAICYNNHVSDELRQLTKEITDSFGSSFDIAETNFDTFTALAGSSPAYIYLFIEALAKAGVKYGFPKEQALSIVGQTVLASSQNLLQGQNSTSDLIDNICSPGGTTIAGLLDLEKNGLTHSVISAIDATIEKAKKL |
| 2GRA Chain:A ((3-270)) | MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEASCIRTREL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150593 for 1945 contacts (-77.4/contact) +
2D Compatibility (PS) -27454 + (NN) -8295 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 3750
Total energy: -207692.0 ( -106.78 by residue)
QMean score : 0.469
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