Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKESFKLIATAAAGLEAIVGREI----RNLGIDCQVEN------GRVRFHGD---------------IKTIIETNLWLRAADRIKIIVGEFPARTFEELFQGVYGL-DWENYLPLGAKFPIAKAKCVKSKLHNEPSVQAISKKAVAKKL-QKVFHRPE--GVPL---QENGAEFKIEVSILKDKATVMIDTTG-SSLFKRGYRAEKGGAPIKENMAAAIIQLSNWFPDKPLIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWPWVDQSQVQKVRDEAESKANYDIDLDISGFDLDGRMVEIARKNAEEAGLGDVIKLKQMRLQDLK--TDKINGVIISNPPYGERLLDDKAVDILY----NEMGQTFAPLKTWSKFILTSDEGFEK---KYGSQADKKRKLYNGTLKVDLYQYYGERVRRQVK |
| 3TLJ Chain:A ((1-362)) | ----MKFLLTTAQGIEDIAKREVSLLLKKLGISFQIEEKPLGIEGRLLLEAEKAYYVDEKGRKRELSISTYLNENSRLLHRVIIEIASEKFNGIEKDESEEALKRIKDFVSSLPVEQFVKVSETFAVRSFRKGDHNITSID---IARTVGEAIFERLSRFGTPLVNLDHPAVIFRAE--LIKDVFFLGIDTTGDSSLHKRPWRVYDHPAHLKASIANAMIELAE-LDGGSVLDPMCGSGTILIELAL----------RRYSGEIIG------IEKYRKH-----------------LIG-----AEMNALAAGVLDKIKFIQGDATQLSQYVDSVD-FAISNLPYG------SMIPDLYMKFFNELAKV---LEKRGVFITTEKKAIEEAIAENGFEIIHHRVIGHGGLMVHLYVVKLEHHH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91814 for 2499 contacts (-36.7/contact) +
2D Compatibility (PS) -33801 + (NN) -11569 + (LL) 3632
1D Compatibility (HY) -21600 + (ID) 5250
Total energy: -160402.0 ( -64.19 by residue)
QMean score : 0.380
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