Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETE--EGLNTVGDLVAYVEEKVK
1HY8 Chain:A ((4-75))
---LERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQQ-
General information:
TITO was launched using:
RESULT:
Template:
1HY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50991 for 489 contacts (-104.3/contact) +
2D Compatibility (PS) -7037 + (NN) -528 + (LL) 736
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -68670.0 ( -140.43 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_1HY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HY8-query.scw
PDB file :
Tito_Scwrl_1HY8.pdb
: