Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRKSMTTTFKIIRGYYLTGVGQEPSAYYFKIRDDFPEFETLKSGDVALTFYQNGEAITSLPALIRIDGVIEAEKQVLEFLQSEKKDHLPMLPLVALYEQFDPLQFNTVMEVFDNLKAEIKRLAKVNYVQGDLFDFMQEGEG
3A4V Chain:A ((233-258))
--------------GYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLGI-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1397 for 89 contacts (-15.7/contact) +
2D Compatibility (PS) -2822 + (NN) -815 + (LL) 5456
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -2578.0 ( -28.97 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_3A4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A4V-query.scw
PDB file :
Tito_Scwrl_3A4V.pdb
: