Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDLTKIDRDLEEAKKKVADLENEKRQAEENLQKQIGKLYVQIQLKKDKSQSYETILDDLKTELELIKQEEKARREEAKNRQLTSSDEH
2FOR Chain:A ((280-304))
------------LEQARKKARDLIDDARQALKQLAEQ------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4628 for 92 contacts (50.3/contact) +
2D Compatibility (PS) -2930 + (NN) -3403 + (LL) 5336
1D Compatibility (HY) -800 + (ID) 600
Total energy: 2231.0 ( 24.25 by residue)
QMean score : 0.726
(partial model without unconserved sides chains):
PDB file :
Tito_2FOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FOR-query.scw
PDB file :
Tito_Scwrl_2FOR.pdb
: