Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTKKIPLRKSVVSGEVIDKRDLLRIVKNKEGQVFIDPTGKQNGRGAYIKLDNDEAILAKKKRVFDRSFSMEVSDEFYDELLAYVDHKVKRRELGLE
4GZB Chain:A ((309-327))
-------------------------------EGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILANRNYPNAERVKIAYAILSGLEQQGKVPL------
General information:
TITO was launched using:
RESULT:
Template:
4GZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1869 for 57 contacts (32.8/contact) +
2D Compatibility (PS) -2071 + (NN) -834 + (LL) 2676
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -60.0 ( -1.05 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_4GZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GZB-query.scw
PDB file :
Tito_Scwrl_4GZB.pdb
: