Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTVKVVYFSSKSNNTHRFVQKLAWSNQRIPSDGSNILVTEDYILIVPTYAGGGDDTKGAVPKQVVQFLNVRQNREHCQGVISSGNTNFGDTYAIAGPIIARKLNVPLLHQFELLGTQEDVTRVKELLCQFTRKDK
2XOE Chain:A ((2-111))
------LVAYDSMTGNVKRFIHKLNMPAVQI---GEDLVIDEDFILI--TYTTGF----GNVPERVLEFL--ERNNEKLKGVSASGNRNWGDMFGASADKISAKYEVPIVSKFELSGTNNDVEYFKERVREIATH--
General information:
TITO was launched using:
RESULT:
Template:
2XOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76603 for 866 contacts (-88.5/contact) +
2D Compatibility (PS) -11482 + (NN) -2469 + (LL) 648
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -103806.0 ( -119.87 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2XOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOE-query.scw
PDB file :
Tito_Scwrl_2XOE.pdb
: