Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPGDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV
3D82 Chain:A ((5-99))
----------KVINFNDKFSLFNQHWSPRVIAEMNDYQFKLVKVE-GEFVWHEHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAKEECKIMIIEPR---
General information:
TITO was launched using:
RESULT:
Template:
3D82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66758 for 600 contacts (-111.3/contact) +
2D Compatibility (PS) -9689 + (NN) 4092 + (LL) 1528
1D Compatibility (HY) -10800 + (ID) 850
Total energy: -82477.0 ( -137.46 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_3D82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D82-query.scw
PDB file :
Tito_Scwrl_3D82.pdb
: