Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAIPAFALSVLSGQFIGQKLADSLVYQASRTVRADFMKGFGNMQLGSDSDTDMFMQTKCTSEA
2KIX Chain:A ((9-18))
--SISSFILSALHFIAWTIGHLNQIKR-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1794 for 30 contacts (-59.8/contact) +
2D Compatibility (PS) -1013 + (NN) 521 + (LL) 2444
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -1292.0 ( -43.07 by residue)
QMean score : 0.083
(partial model without unconserved sides chains):
PDB file :
Tito_2KIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KIX-query.scw
PDB file :
Tito_Scwrl_2KIX.pdb
: