Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKVFNVREEEATLAQDWANRNHVELSMSEGPLTLETVNEVEGFDGIANAQIGPLDDAI-YPLLKEMGIKQIAQRSAGVDMYNLELAKQHGIIISNVPSYSPESIAEFTVTIALNLIRKVELIRANVREQNFSWTLPIRGRVLGNMTVAIIGTGRIGLATAKIFKGFGCRVIGYDIYHNPMADGILEYVNSVEEAVEKADLVSLHMPPTAENTHLFNLDMFKQFKKGAILMNMARGALVETKDLLEALDQGLLEGAGIDTYEFEGPYIPKNCQGQDISDKDFLRLINHPKVIYTPHAAYYTDEAVKNLVEGALNACVEVVETGTTTTRVN |
| 4PRK Chain:A ((1-316)) | MKIAVFSPSESERKLVAATEKKFGCELKLIDESLSAENVDQVADCDGVLLKPLGNLDDEIVYKKLADYGIKSIGLRIVGTNTIDFDLAKKYHLTVTNVPVYSPRAIAEMAVTQAMYLNRKIGEFKANMDKGDFTNPDSLISNEIYNKTIGLIGVGHIGSAVAQIFSAMGAKVLAYDVIYNPEVEPYLTYAD-FDTVLKEADIISLHTPLLKSTENMIGKKQFAEMKNDAILINAARGELVDTAALIEALEKHEIAAAGLDTLAHESSYFFKKVDDAQIP-ADYKKLAAMPNVIVTPHSAYFTKTSVRNMIEISLRDTIALANGERAHFVVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198337 for 2555 contacts (-77.6/contact) +
2D Compatibility (PS) -34474 + (NN) -20011 + (LL) -104
1D Compatibility (HY) -25200 + (ID) 5650
Total energy: -283776.0 ( -111.07 by residue)
QMean score : 0.547
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