Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQTNEILAKANVLVDDVNGKVSTIDPLFVAIADLSESVSDLNLQA--RHIGQKASSATSSVTKAGSALAIG---------KAASKIFRKKGDKK |
4C5M Chain:A ((83-168)) | ---------------------------------------------------TEEIIKRAGEVYEASNAQYFVVDPVMVCK----EVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 9147 for 433 contacts (21.1/contact) +
2D Compatibility (PS) -7849 + (NN) -2855 + (LL) 6592
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: 285.0 ( 0.66 by residue)
QMean score : 0.239
|
|
|