Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNSTLTKLTRVAILSALCVVLRYAFAPLPNIQPITAIFLITVVLFDLKEGVATVTITMLVSSFLMGFGPWVFLQIISFTLILCLWKFLIYPLTKAVCFGKITEVVLQTFFAGGLGVVYGVIIDTCFAWLYHMPWWTYVLAGLSFNMAHALSTCLFYPLLLPILRRFRNEKIH |
| 1KVD Chain:A ((22-47)) | -------------------------------------------AATFGGLAGGIVGCIAAGILAILQGFEVNWHNGGGGDRSNPV----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11849 for 132 contacts (-89.8/contact) +
2D Compatibility (PS) -2515 + (NN) 1040 + (LL) 12752
1D Compatibility (HY) 1200 + (ID) 300
Total energy: 328.0 ( 2.48 by residue)
QMean score : -0.091
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