Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYGR----IVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQS-ALLAYQEVYGQLSSPY---MVVGNVHDFNDGLN-LSYQLVKEVSIDGILATSDEVAAGLIKGYEESRKKCPY---IIGQECLLVGQLLK--LPTIDHKSYYLGKLAFKQALAEKISQEVLFSEFLSQDN |
| 3OQN Chain:A ((4-303)) | --TIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT---DEHVAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKG--HTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158405 for 2287 contacts (-69.3/contact) +
2D Compatibility (PS) -30740 + (NN) -10619 + (LL) 844
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -219420.0 ( -95.94 by residue)
QMean score : 0.513
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