Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVITVKNDIEGGKIAFTLLEEKMKAGAQT------LGLATGSSPITFYEEIVK----SNLDFSNMVSINLDEYVGIAASNDQSYSYFMHKHLFDAK--PFKENNLPNGLAKDLKEEIKRYDAVINA-NPIDFQILGIGRNGHIGFNEPGTPFDITTHVVDLAPSTIEANSRFF-NSIDDVPKQALSMGIGSIMKSKTIVLVAYGIEKAEAIASMIKGPITEDMPASILQKHDDVVIIVDEAAASKL
1HOR Chain:A ((1-247))
MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMEL
General information:
TITO was launched using:
RESULT:
Template:
1HOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138169 for 1964 contacts (-70.4/contact) +
2D Compatibility (PS) -25379 + (NN) -13939 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 4050
Total energy: -201937.0 ( -102.82 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1HOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HOR-query.scw
PDB file :
Tito_Scwrl_1HOR.pdb
: