Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINID-----EKPEKIEYVKNL-GFSAAPVIEAGNVVFSGFQPSKLKELV
3IC4 Chain:A ((12-90))
-AEVLMYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDKHVLGYNEEKLKELI
General information:
TITO was launched using:
RESULT:
Template:
3IC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47068 for 490 contacts (-96.1/contact) +
2D Compatibility (PS) -7777 + (NN) -2904 + (LL) 208
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -64541.0 ( -131.72 by residue)
QMean score : 0.819
(partial model without unconserved sides chains):
PDB file :
Tito_3IC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IC4-query.scw
PDB file :
Tito_Scwrl_3IC4.pdb
: