Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTYEKIYQILSKNN-NFISGETMANQLNISRTAIWKGIKTLEELGLEIESVTNKGYRLVSGDILLPEQLEQEIGIKVSLNNNSA------------STQLDAKMGIESKLKTPHLFLAPNQKKAKGRFDRPFFTSNQGGIYMSLLLQPNVPIEDIKPYTVMVASSAVKAISRLTGITPEIKWVNDIYLDNKKIAGILTEAIASVESGLVTNVIIGLGINF--YIKEFPRALTKRAGSL-FTEQPTITRNQ----LITEI---WNLFFNIPLEDHLKVYREKSLVLDKTVSFMDGQTMYSGKAIDITDKGYLVVELDDGQLKTLRSGEISLSSW |
| 3RKY Chain:A ((3-323)) | -KYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQ----LPDIWYQ--GIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGN-QSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDG--IEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYNAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126431 for 2206 contacts (-57.3/contact) +
2D Compatibility (PS) -31490 + (NN) -8699 + (LL) 928
1D Compatibility (HY) -26400 + (ID) 5300
Total energy: -197392.0 ( -89.48 by residue)
QMean score : 0.482
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