Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
1WKJ Chain:A ((1-132))
MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFA-----TTIDENVIHGSATLEDAQREIALFFRP
General information:
TITO was launched using:
RESULT:
Template:
1WKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73660 for 1001 contacts (-73.6/contact) +
2D Compatibility (PS) -13935 + (NN) -3438 + (LL) -44
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -109427.0 ( -109.32 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_1WKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKJ-query.scw
PDB file :
Tito_Scwrl_1WKJ.pdb
: