Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MRESIFEETAKGKVS-RHV-LLTILLALILLFTADFLTYIIIELIISLDFWKLEWDSDIVQLIILLATSISTVMLFMWVKFKEKRPISSLGLFKEGALTELSRGWLVESVLFGACLILTIISGSGVIETVRFTADKLIWFLIFAVGWQVQSASVE--ILCRGWLLPVSATKYS-KIVSVSISSIFFGLLHSANNHVSLISIFNLCLFGLFLSLYVILKGNIWGACGIHGAWNCVQGSVFGIEVSGEPMLSNSLVHVKTYGADWISGGKFGVEGSMITSIVLIVACYWLYQKSNFPYD |
3DU1 Chain:X ((0-236)) | HMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGAD-LSYA--------DLRQTRLGKSNFSHTCLREADLSEAILW--------------GIDLSEA--DLYRAILREADLTGAKLVKTRLEEANLIKAS-------------LCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLDGAKLCRANFGRT---IQWGNL--AADLSGA------SLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIM-------------PDGSIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127456 for 2084 contacts (-61.2/contact) +
2D Compatibility (PS) -22054 + (NN) 17549 + (LL) 7052
1D Compatibility (HY) 19200 + (ID) 650
Total energy: -106359.0 ( -51.04 by residue)
QMean score : 0.082
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