Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYAQLIKHYGQLLEACGEEVENFIYVLKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPETEELVDLILSE-NKVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLAKENANNCDAEVTFI--ESDVFSNISGKF---DIIVSNPPYISYNDKDEVGKNVLASEPHSALFADEEGLAIYRKIIENSREYLQPRGKLYF-EIGYKQGDDLRSLLKRYFPNNRCRVLKDIFGKDRMVVLDNE |
| 1NV9 Chain:A ((53-281)) | ---------------------------------------LFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAI-VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYV--KSSA------LF-EPPEALFGGEDGLDFYREFFGR----YDTSGKIVLMEIGEDQVEELKKIV------SDTVFLKDSAGKYRFLLLNRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69288 for 1665 contacts (-41.6/contact) +
2D Compatibility (PS) -23482 + (NN) -13238 + (LL) 4008
1D Compatibility (HY) -20400 + (ID) 3950
Total energy: -126350.0 ( -75.89 by residue)
QMean score : 0.504
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