Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKTIQKELEGLDIRFDEPLKKYTYTKVGGPADYLAFPRNRLELSRIVKFANSQNIPWMVLGNASNIIVRDGGIRGFVI-MFDKLSTVTVNGYVIEAEAGANLIETTRIARYHSLTGFEFACGIPGSVGGAVFMNAGAYGGEIAHILLSAQVLTPQGELKTIEARNMQFGYRHSVIQESGDIVISAKFALKPGDHLMITQEMDRLTYLRELKQPLEYPSCGSVFKRPPGHFAGQLISEAHLKGQRIGGVEVSQKHAGFMVNIAEGSAQDYENLIEHVINTVESTSGVHLEPEVRIIGESLL |
| 2GQU Chain:A ((11-254)) | -------------------LKDYTTLGVGGPAELWTV-ETREELKR------ATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDLKGWV---GAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH-DGAFHVYCPEELGFGYRKSHLPPGG-IVTRVRLKLKERPKEEILRRMAEVDRARK-GQP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEELPLELEWEVWP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131230 for 1961 contacts (-66.9/contact) +
2D Compatibility (PS) -25610 + (NN) -2893 + (LL) 3144
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -175689.0 ( -89.59 by residue)
QMean score : 0.424
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